Method of searching database of three-dimensional protein structures
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United States of America Patent
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Jul 3, 2001
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N/A
app pub date -
Feb 16, 1999
filing date -
Feb 16, 1998
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Expired
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Abstract
A method of searching a database of three-dimensional protein structures. The method comprises the steps of setting a three-dimensional protein structure; forming a two-dimensional binary distance map based on the three-dimensional protein structure; forming a one-dimensional peripheral distribution based on the distance map; and comparing the one-dimensional peripheral distribution of a protein structure with that of another protein structure a dynamic programming algorithm. The method increases detection sensitivity and search speed.
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