METHOD OF IDENTIFYING SPLICED PEPTIDE

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United States of America Patent

APP PUB NO 20240345096A1
SERIAL NO

18292641

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Abstract

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A method of identifying an unknown spliced peptide derived from a known parent peptide contained in a biological sample, the method comprising: (1) a first step involving performing mass spectrometry on the sample to obtain mass spectrometry data regarding a peptide contained in the sample; (2) a second step involving searching a primary library, which is a database of known amino acid sequences, for an amino acid sequence that matches the mass spectrometry data, to identify a parent peptide contained in the sample, (3) a third step involving creating a secondary library including a candidate group of spliced peptides obtainable from the identified parent peptide; and (4) a fourth step involving searching the secondary library for an amino acid sequence that matches the mass spectrometry data, to identify a spliced peptide contained in the sample.

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Patent OwnerAddress
PROVIDENCE HEALTH & SERVICES-OREGON4805 NE GLISAN ST 5F40 PORTLAND OR 97213

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Inventor(s)

Inventor Name Address # of filed Patents Total Citations
IWAMOTO, Noriko Columbia, US 21 30
Koguchi, Yoshinobu Portland, US 3 0
SHIMADA, Takashi Columbia, US 179 1235

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