METHOD FOR QUICK-SEARCH OF LOCI-OF-INTEREST IN A GENE SEQUENCE OF A TARGET BIOLOGICAL VIRUS
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Oct 1, 2015
app pub date -
Sep 10, 2014
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Mar 28, 2014
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Abstract
In a method for quick-search of loci-of-interest in a gene sequence of a target biological virus, a computer executes a phylogenetic algorithm to generate phylogenetic tree information, which is generated based on a selected gene segment of the target biological virus and a corresponding gene segment of each of related biological viruses. A set of to-be-matched biological viruses is determined based on the phylogenetic tree information. A computer matches the gene sequences of the to-be-matched biological viruses in the set so as to find the loci-of-interest in the gene sequence of the target biological virus.
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