QUATERNIONIC ALGEBRA APPROACH TO DNA AND RNA TANDEM REPEAT DETECTION
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United States of America Patent
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Issued Date -
Jun 25, 2009
app pub date -
Dec 21, 2007
filing date -
Dec 21, 2007
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Abstract
A method of detecting and outputting tandem repeats in a sequence of symbols comprising a) mapping the symbols to quaternions; b) constructing a Quaternionic Periodicity Transform (QPT); c) computing the QPT of the sequence to determine the tandem repeats of the sequence; d) post-processing of the QPT; e) outputting a list of tandem repeats obtained from step d) to a computer's memory. In embodiments, the sequence of symbols is a sequence of letters representing nucleotides in a DNA or RNA sequence.
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